1 Her face so fair as flesh it seemed not,

so fair as > [was so fair that like]

2 But heavenly portrait of bright angel's hue,

portrait > image hue > appearance, form

3 Clear as the sky, without blame or blot,

Clear > Brightly shining blame > fault

4 Through goodly mixture of complexions due;

complexions due > (Due or proper combination of the four cardinal "humours" of the body whose proportions, in medieval physiology, were supposed to determine one's mental and physical qualities. Cf. 306.38:5, 310.59:3)

5 And in her cheeks the vermeil red did show

vermeil > scarlet