As already remarked, Ferns probably developed out of the lower liverworts in the beginning of the primary period. In their organization Ferns rise considerably above Mosses, and in their more highly developed forms even approach the flowering plants. In Mosses, as in Thallus plants, the entire body is composed of almost equi-formal cells, little if at all differentiated; but in the tissues of Ferns we find those peculiarly differentiated strings of cells which are called the vessels of plants, and which are universally met with in flowering plants. Hence Ferns are sometimes united as “vascular Cryptogams” with Phanerogams, and the group so formed is contrasted as that of the “vascular plants” with “cellular plants,”—that is, with “cellular cryptogams” (Mosses and Thallus plants). This very important process in the organization of plants—the formation of vessels—first occurred, therefore, in the Devonian period, consequently in the beginning of the second and smaller half of the organic history of the earth.

The branch of Ferns, or Filicinæ, is divided into five distinct classes: (1) Frondose Ferns, or Pteridæ; (2) Reed Ferns, or Calamariæ; (3) Aquatic Ferns, or Rhizocarpeæ; (4) Snakes Tongues, or Ophioglossæ; and (5) Scale Ferns, or Lepidophyta. By far the most important of these five classes, and also the richest in forms, were first the Frondose Ferns, and then the Scale-ferns, which formed the principal portion of the palæolithic forests. The Reed Ferns, on the other hand, had at that time already somewhat diminished in number; and of the Aquatic Ferns, we do not even know with certainty whether they then existed. It is difficult for us to form any idea of the very peculiar character of those gloomy palæolithic fern forests, in which the whole of the gay abundance of flowers of our present flora was entirely wanting, and which were not enlivened by any birds. Of the flowering plants there then existed only the two lowest classes, the pines and palm ferns, with naked seeds, whose simple and insignificant blossoms scarcely deserve the name of flowers.

The phylogeny of Ferns, and of the Gymnosperms which have developed out of them, has been made especially clear by the excellent investigations which Edward Strasburger published in 1872, on “The Coniferæ and Gnetaceæ,” as also “On Azolla.” This thoughtful naturalist and Charles Martins, of Montpellier, are among the few botanists who have thoroughly understood the fundamental value of the Theory of Descent, and the mechanical-causal connection between ontogeny and phylogeny. The majority of botanists do not even yet know the important difference between homology and analogy, between the morphological and physiological comparison of parts—which has long since been recognized in zoology—but Strasburger has employed this distinction and the principle of evolution in his “Comparative Anatomy of the Gymnosperms,” in order to sketch the outlines of the blood relationship of this important group of plants.

The class among Ferns which has developed most directly out of the Liverworts is the class of real Ferns, in the narrow sense of the word, the Frondose Ferns (Filices, or Phyllopterides, also called Pteridæ). In the present flora of the temperate zones this class forms only a subordinate part, for it is in most cases represented only by low forms without trunks. But in the torrid zones, especially in the moist, steaming forests of tropical regions, this class presents us with the lofty palm-like fern trees. These beautiful tree-ferns of the present day, which form the chief ornament of our hot-houses, can however give us but a faint idea of the stately and splendid frondose ferns of the primary period, whose mighty trunks, densely crowded together, then formed entire forests. These trunks, accumulated in super-incumbent masses, are found in the coal seams of the Carboniferous period, and between them, in an excellent state of preservation, are found the impressions of the elegant fan-shaped leaves, crowning the top of the trunk in an umbrella-like bush. The varied outlines and the feather-like forms of these fronds, the elegant shape of the branching veins or bunches of vessels in their tender foliage, can still be as distinctly recognized in the impressions of the palæolithic fronds as in the fronds of ferns of the present day. In many cases even the clusters of fruit, which are distributed on the lower surface of the fronds, are distinctly preserved. After the Carboniferous period, the predominance of frondose ferns diminished, and towards the end of the secondary period they played almost as subordinate a part as they do at the present time.

The Calamariæ, Ophioglossæ, and Rhizocarpeæ seem to have developed as three diverging branches out of the Frondose Ferns, or Pteridæ. The Calamariæ, or Calamophyta, have remained at the lowest level among these three classes. The Calamariæ comprise three different orders, of which only one now exists, namely, the Horse-tails (Equisetaceæ). The two other orders, the Giant Reeds (Calamiteæ), and the Star-leaf Reeds (Asterophylliteæ), are long since extinct. All Calamariæ are characterized by a hollow and jointed stalk, stem, or trunk, upon which the branches and leaves (in cases where they exist) are set so as to encircle the jointed stem in whorls. The hollow joints of the stalk are separated from one another by partition walls. In Horse-tails and Calamiteæ the surface is traversed by longitudinal ribs running parallel, as in the case of a fluted column, and the outer skin contains so much silicious earth in the living forms, that it is used for cleansing and polishing. In the Asterophylliteæ, the star-shaped whorls of leaves were more strongly developed than in the two other orders. There exist, at present, of the Calamariæ only the insignificant Horse-tails (Equisetum), which grow in marshes and on moors; but during the whole of the primary and secondary periods they were represented by great trees of the genus Equisetites. There existed, at the same time, the closely related order of the Giant Reeds (Calamites), whose strong trunks grew to a height of about fifty feet. The order of the Asterophyllites, on the other hand, contained smaller and prettier plants, of a very peculiar form, and belongs exclusively to the primary period.

Among all Ferns, the history of the third class, that of the Root, or Aquatic Ferns (Rhizocarpeæ, or Hydropteridæ), is least known to us. In their structure these ferns, which live in fresh water, are on the one hand allied to the frond ferns, and on the other to the scaly ferns, but they are more closely related to the latter. Among them are the but little known moss ferns (Salvinia), clover ferns (Marsilea), and pill ferns (Pilularia) of our fresh waters; further, the large Azolla which floats in tropical ponds. Most of the aquatic ferns are of a delicate nature, and hence ill-suited for being petrified. This is probably the reason of their fossil remains being so scarce, and of the oldest of those known to us having been found in the Jura system. It is probable, however, that the class is much older, and that it was already developed during the palæolithic period out of other ferns by adaptation to an aquatic life.

The fourth class of ferns is formed by the Tongue Ferns (Ophioglossæ, or Glossopterides). These ferns, to which belongs the Botrychium, as well as the Ophioglossum (adder’s-tongue) of our native genera, were formerly considered as forming but a small subdivision of the frondose ferns. But they deserve to form a special class, because they represent important transitional forms from the Pterideæ and Lepidophytes towards higher plants, and must be regarded as among the direct progenitors of the flowering plants.

The fifth and last class is formed by the Scale Ferns (Lepidophytes, or Selagines). In the same way as the Ophioglossæ arose out of the frondose forms, the scale ferns arose out of the Ophioglossæ. They were more highly developed than all other ferns, and form the transition to flowering plants, which must have developed out of them. Next to the frondose ferns they took the largest part in the composition of the palæolithic fern forests. This class also contains, as does the class of reed ferns, three nearly related but still very different orders, of which only one now exists, the two others having become extinct towards the end of the Carboniferous period. The scaled ferns still existing belong to the order of the club-mosses (Lycopodiaceæ). They are mostly small, pretty moss-like plants, whose tender, many-branched stalk creeps in curves on the ground like a snake, and is densely encompassed and covered by small scaly leaves. The pretty creeping Lycopodium of our woods, which mountain tourists twine round their hats, is known to all, as also the still more delicate Selaginella, which under the name of creeping moss is used to adorn the soil of our hot-houses in the form of a thick carpet. The largest club-mosses of the present day are found in the Sunda Islands, where their stalks rise to the height of twenty-five feet, and attain half a foot in thickness. But in the primary and secondary periods even larger trees of this kind were widely distributed, the most ancient of which probably were the progenitors of the pines (Lycopodites). The most important dimensions were, however, attained by the class of scale trees (Lepidodendreæ), and by the seal trees (Sigillarieæ). These two orders, with a few species, appear in the Devonian period, but do not attain their immense and astonishing development until the Carboniferous period, and become extinct towards the end of it, or in the Permian period directly following upon it. The scale trees, or Lepidodendreæ, were probably more closely related to club-mosses than to Sigillarieæ. They grew into splendid, straight, unbranching trunks which divided at the top into numerous forked branches. They bore a large crown of scaly leaves, and like the trunk were marked in elegant spiral lines by the scars left at the base of the leaf stalks which had fallen off. We know of scale-marked trees from forty to sixty feet in length, and from twelve to fifteen feet in diameter at the root. Some trunks are said to be even more than a hundred feet in length. In the coal are found still larger accumulations of the no less highly developed but more slender trunks of the remarkable seal trees, Sigillarieæ, which in many places form the principal part of coal seams. Their roots were formerly described as quite a distinct vegetable form (under the name of Stigmaria). The Sigillarieæ are in many respects very like the scale-trees, but differ from them and from ferns in general in many ways. They were possibly closely related to the extinct Devonian Lycopterideæ, combining characteristic peculiarities of the club-mosses and the frondose ferns, which Strasburger considers as the hypothetical primary form of flowering plants.

In leaving the dense forests of the primary period, which were principally composed of frond ferns (Lepidodendreæ and Sigillarieæ), we pass onwards to the no less characteristic pine forests of the secondary period. Thus we leave the domain of the Cryptogamia, the plants forming neither flowers nor seeds, and enter the second main division of the vegetable kingdom, namely, the sub-kingdom of the Phanerogamia, flowering plants forming seeds. This division, so rich in forms, containing the principal portion of the present vegetable world, and especially the majority of plants living on land, is certainly of a much more recent date than the division of Cryptogamia. For it can have developed out of the latter only in the course of the palæolithic period. We can with full assurance maintain that, during the whole archilithic period, hence during the first and longer half of the organic history of the earth, no flowering plants as yet existed, and that they first developed during the primary period out of Cryptogamia of the fern kind. The anatomical and embryological relation of Phanerogamia to the latter is so close, that from it we can with certainty infer their genealogical connection, that is, their true blood relationship. Flowering plants cannot have directly arisen out of thallus plants, nor out of mosses; but only out of ferns, or Filicines. Most probably the scaled ferns, or Lepidophyta, and more especially amongst these the Lycopodiaceæ, forms closely related to the Selaginella of the present day, have been the direct progenitors of the Phanerogamia.

On account of its anatomical structure and its embryological development, the sub-kingdom of the Phanerogamia has for a long time been divided into two large branches, into the Gymnosperms, or plants with naked seeds, and the Angiosperms, or plants with enclosed seeds. The latter are in every respect more perfect and more highly organized than the former, and developed out of them only at a late date during the secondary period. The Gymnosperms, both anatomically and embryologically, form the transition group from Ferns to Angiosperms.