Confusion was indeed rampant at that time. Wherever Hellenists and Hasmonæans met, a disgraceful conflict was the result; no voice of authority forbade such practices; there was not even a court of justice. Famine did but aggravate this miserable state of things. "There was great affliction in Israel, the like whereof had not been seen since a prophet had been among them."

In their anguish the unfortunate people turned to Jonathan Haphus, hoping that he would humiliate the Hellenists, and restore peace to the country. But Jonathan did not possess the warlike energy of his brother Judas, nor was he supported by the whole nation. He was more of a politician than a general. Too weak to attack the army that Bacchides had quartered in Judæa, he was merely able to take measures of defence. Threatened by the Syrian host, the Hasmonæans entrenched themselves in the woodland country on the shores of the Jordan; but, conscious of their weakness, they sent their wives and children to join the friendly Nabatæans. On the way, however, this peaceful troop was suddenly attacked by a warlike tribe, that of Bene Amri, from the city of Madaba, and with their leader, the Hasmonæan Johanan, was put to the sword—a deed of infamy that was subsequently avenged by Jonathan.

But even in their hiding-places, in the valley of the Jordan, the Hasmonæans found no rest. Bacchides sought them out, attacked them on the Sabbath-day, when indeed they were not forbidden to defend themselves, but when they were too much hampered by legal minutiæ to join battle with full force, and compelled them to swim the river, and find safety on the opposite side. The whole country was now at the mercy of the enemy. Bacchides restored the fortresses, reinforced the strong places, the Acra, Bethzur and Gazara, storing them with provisions and weapons. He enforced the loyalty of the people by seizing the children of the most distinguished families, and placing them as hostages in the Acra. Thus, in the space of one year (160–159), Bacchides succeeded in entirely putting down all armed opposition to the Syrian rule, a feat which the previous Syrian commanders had not been able to accomplish in six years.

The strong arm of the Maccabæan hero was sorely missed. Had King Demetrius wished to make any important changes in the religious condition of the Judæans, he could not have chosen a more opportune moment; the strength of the people was broken, and their leaders were banished from the scene of action. But the successor of Antiochus Epiphanes, sunk in a life of debauchery, was content with having assured himself of the sovereignty over Judæa, and of the annual payment of the tribute-money. The Syrian court, even after the death of Alcimus, troubled itself but little, if at all, about the religion of the Judæans. Although disliked by the people, the high-priest Alcimus had not belonged to the extreme Hellenists. He was merely an ambitious man who always worshipped the rising power. An offence with which he was reproached appears, on careful examination, hardly to have been a sin against the religion of the Judæans. It appears that between the inner and outer courts of the Temple there was a sort of wooden screen, of lattice-work, called "Soreg." This screen, the work of the prophets, as it was called, was the boundary, beyond which no heathen, nor any one who had become unclean by contact with a corpse might pass. But Alcimus gave orders for the destruction of this partition, probably with the intention of admitting the heathen within the sacred precincts. The pious Judæans were so highly incensed at this, that when Alcimus was seized, directly after this command, with paralysis of speech and of limbs, from which he never recovered, they attributed his fatal illness to the wrath of Heaven.

After the death of Alcimus, the Syrian court left the office of high-priest unfilled, evidently with the intention of removing even this semblance of Judæan independence. For seven years the Temple had no high-priest, and the country, no political head. Probably the priestly functions were carried on by a substitute for the high-priest, under the name of Sagan. We hear nothing of further Syrian interference. Bacchides left the country, and Judæa was at peace for two years (159–157).

Jonathan and Simon, the leaders of the Hasmonæans, made use of this pause to strengthen themselves, and to arm their followers. They fortified the oasis of Bethhagla, in the desert of Jericho, within the grateful shade of a wood and near a spring with an ample supply of sweet and limpid water. The river Jordan protected their rear.

In the conduct of this war Jonathan enjoyed no other authority than that of a Bedouin chief who extorts an armistice from the governing power; but as the sympathy of the people went with him, and as he carried his sword in a holy cause, he attained greater power. Without doubt the harm he did the Hellenists was considerable, for we hear of their carrying fresh complaints to the Syrian court. But as Demetrius was hopelessly indifferent, and as Bacchides was weary of carrying on a guerilla warfare at a great disadvantage, they remained inactive, whilst the Hellenists proposed to fall treacherously upon Jonathan and Simon, and to deliver them as prisoners to the Syrians. An ambush was laid for the two commanders, but the conspiracy was revealed, and the Maccabæans were able to take measures of defence upon this occasion. Fifty Hellenists were seized and executed. Bacchides, who had counted upon the rapid success of the conspiracy, felt himself involved in a new war, and proceeded to besiege the Hasmonæans in their fortress of Bethhagla. But the latter had attracted a number of followers, large enough to enable them to divide their forces. Jonathan and his followers defended the fortress, whilst Simon with his division, sallying out by an unguarded road, attacked the Syrians in the rear, and after defeating the Hellenists, burnt the siege-machines of the enemy. Threatened on both sides, Bacchides was forced, not without a considerable loss of soldiers, to raise the siege of Bethhagla, and as an outlet for his rage executed many of the Hellenists in his army. This was an appropriate moment for Jonathan to demand a truce, which was granted. The condition agreed upon was that Jonathan, after giving hostages as pledges of peace, might return to Judæa unmolested, but should not be permitted to dwell in Jerusalem. Prisoners were exchanged, and Bacchides marched out of the land, leaving his allies, the Hellenists, unprotected.

Jonathan took up his position in the fortress of Michmash, where Saul had once fixed his headquarters. He was tacitly acknowledged as the head of the Judæan people, and treated its enemies with relentless severity. For nearly four years "the sword rested in Israel." How this undecided state of things would finally have ended it is difficult to say, but it is certain that, without the aid of an unexpected piece of good fortune, the dream of the Hasmonæans could never have been realised.

A revolution in the Syrian kingdom effected a happy change in the fate of Judæa, and increased the power of Jonathan and the nation.

An obscure youth of Smyrna, Alexander Balas, was the cause of this revolution. He happened to bear an extraordinary likeness to the late king of Syria, Antiochus Eupator. This resemblance prompted Attalus, king of Pergamum, to induce Alexander to play the part of pretender to the Syrian throne. Alexander, richly supplied by Attalus with money and troops, was recognised by the Roman Senate as heir to the kingdom of Syria. Demetrius, roused from his indolence, began to look about him for allies. Above all he was anxious to win Jonathan over to his side. This led him to write a flattering epistle to the Hasmonæan commander, in which he called him his ally, and authorised him to raise troops and procure weapons. The Judæan hostages were at once to be set free.