The rest of the Inaugural was chiefly devoted to the press and its licentiousness. Jefferson expressed himself strongly in regard to the slanders he had received, and even hinted that he would be glad to see the State laws of libel applied to punish the offenders; but he pointed out that slander had no political success, and that it might safely he disregarded as a political weapon. He urged “doubting brethren” to give up their fears and prejudices, and to join with the mass of their fellow-citizens. “In the mean time let us cherish them with patient affection; let us do them justice, and more than justice, in all competitions of interest.” Finally, as though to silence the New-England pulpit, he closed with a few words which the clergy might perhaps think misplaced in the mouth of so earnest a deist,—an invocation of “that Being in whose hands we are, who led our forefathers, as Israel of old,” to the “country flowing with all the necessaries and comforts of life, ... and to whose goodness I ask you to join with me in supplications.”

The Second Inaugural strode far beyond the first in the path of democracy, away from the landmarks of Virginia republicanism, betraying what Jefferson’s friends and enemies alike thought a craving for popularity. If this instinct sometimes led him to forget principles he had once asserted, and which he would some day again declare vital, the quality was so amiable as to cover many shortcomings; but its influence on national growth could not be disputed. Jefferson cherished but one last desire,—to reach the end of his next term without disaster. He frankly expressed this feeling in a letter written to General Heath soon after the autumn election of 1804, which gave him the electoral vote of Massachusetts:—

“I sincerely join you,” said he, “in congratulations on the return of Massachusetts into the fold of the Union. This is truly the case wherein we may say, ‘This our brother was dead, and is alive again; and was lost, and is found.’ It is but too true that our Union could not be pronounced entirely sound while so respectable a member as Massachusetts was under morbid affection. All will now come to rights.... The new century opened itself by committing us on a boisterous ocean; but all is now subsiding; peace is smoothing our path at home and abroad; and if we are not wanting in the practice of justice and moderation, our tranquillity and prosperity may be preserved until increasing numbers shall leave us nothing to fear from abroad. With England we are in cordial friendship; with France in the most perfect understanding; with Spain we shall always be bickering, but never at war till we seek it. Other nations view our course with respect and friendly anxiety. Should we be able to preserve this state of public happiness, and to see our citizens, whom we found so divided, rally to their genuine principles, I shall hope yet to enjoy the comfort of that general good-will which has been so unfeelingly wrested from me, and to sing at the close of my term the Nunc dimittis, Domine, with a satisfaction leaving nothing to desire but the last great audit.”[4]

He could not forgive the New England clergy their want of feeling in wresting from him ever so small a share of the general good-will, and he looked forward with impatience to the moment when he should enjoy universal applause and respect. In December, 1804, when this letter was written, he felt confident that his splendid triumph would last unchecked to the end of his public career; but the prize of general good-will, which seemed then almost won, continually eluded his grasp. The election of November, 1804, was followed by the session of 1804–1805, which stirred bad blood even in Virginia, and betrayed a spirit of faction among his oldest friends. His Inaugural Address of March, 1805, with its mixture of bitter-sweet, was answered within a few weeks by Massachusetts. At the April election the Federalists reversed the result of November, and re-elected Caleb Strong as governor by a vote of about 35,200 against 33,800, with a Federalist majority in the Legislature. Even in Pennsylvania divisions among Jefferson’s followers increased, until in the autumn of 1805 Duane and Leib set up a candidate of their own choice for governor, and forced McKean, Dallas, and Gallatin’s friends to unite with the Federalists in order to reelect McKean. Jefferson balanced anxiously between these warring factions, trying to offend neither Duane nor John Randolph, nor even Burr, while he still drew the mass of moderate Federalists to sympathize in his views.

Thus the new Presidential term began, bringing with it little sign of change. The old arrangements were continued, with but one exception. Madison, Gallatin, Robert Smith, and Dearborn remained in the Cabinet; but Attorney-General Lincoln resigned, and Robert Smith asked to be transferred from the Navy Department to the Attorney-General’s office.[5] After some hesitation Jefferson yielded to Smith’s request and consented to the transfer. As Smith’s successor in the Navy Department Jefferson selected Jacob Crowninshield, a member of Congress from Massachusetts, who was then at Washington. Crowninshield, in consequence of his wife’s objection to leaving her family, declined the offer, Jan. 29, 1805,[6] but the President nevertheless sent the nomination to the Senate, March 2, 1805, together with that of Robert Smith, “now Secretary of the Navy to be Attorney-General of the United States.” The same day the Senate confirmed both appointments, and the commissions were regularly issued, March 3,—Robert Smith apparently ceasing thenceforward to possess any legal authority over the Navy Department.

Nevertheless Crowninshield persisted in declining the office, and Robert Smith continued to act as Secretary of the Navy, probably by the verbal request of the President. At length he consented to retain his old position permanently, and Jefferson sought for a new attorney-general. He offered the post, June 15, to John Julius Pringle of South Carolina, who declined. He then offered it, July 14, to John Thomson Mason, who also declined. August 7, Jefferson wrote to Senator Breckinridge of Kentucky, asking him to accept the office of attorney-general, and a temporary commission was the same day issued to him.

When Congress met, Dec. 2, 1805, Breckenridge was attorney-general under a temporary commission, and Robert Smith, who had ceased to be Secretary of the Navy on the confirmation of his successor, March 3, was acting as secretary under no apparent authority. Dec. 20, 1805, the President sent a message to the Senate making nominations for vacancies which had occurred during the recess, for which commissions had been granted “to the persons herein respectively named.” One of these persons was John Breckinridge of Kentucky to be Attorney-General of the United States, and the nomination was duly confirmed. Breckenridge’s permanent commission bore date Jan. 17, 1806.

These dates and facts were curious for the reason that Robert Smith, who had ceased to be Secretary of the Navy, March 3, 1805, ceased necessarily to be attorney-general on the confirmation of Breckinridge, and continued to act as Secretary of the Navy without authority of law. The President did not send his name to the Senate, or issue to him a new commission either permanent or temporary. On the official records of the Department of State, not Robert Smith but Jacob Crowninshield was Secretary of the Navy from March 3, 1805, till March 7, 1809, when his successor was appointed, although Jacob Crowninshield died April 15, 1808, and Robert Smith never ceased to act as Secretary of the Navy from his appointment in 1801 to his appointment as Secretary of State in 1809. During the whole period of Jefferson’s second administration, his Secretary of the Navy acted by no known authority except the verbal request or permission of the President.

In perfect quiet, disturbed only by rumors of wars abroad, spring crept forward to summer, summer ripened to autumn. Peace was restored with Tripoli; commerce grew apace; the revenue rose to $14,000,000; the Treasury was near a surfeit; no sign appeared of check to the immense prosperity which diffused itself through every rivulet in the wilderness, and the President could see no limit to its future increase. In 1804 he had sent out an expedition under Captain Meriwether Lewis to explore the Louisiana purchase along the course of the Missouri River. May 14, 1804, Lewis and his party began their journey from St. Louis, and without serious difficulty reached the Mandan towns, sixteen hundred and nine miles from the starting point, where, Nov. 1, 1804, they went into winter quarters. April 8, 1805, Lewis resumed his journey to the westward, sending the report of his wanderings to Washington. This report told only of a vast region inhabited by Indian tribes and disturbed by the restless and murderous Sioux; but it served to prove the immensity of the new world which Jefferson’s government had given to the American people. Other explorations had been begun along the line of the Red and Washita rivers. In such contributions to human knowledge Jefferson took keen interest, for he had no greater delight than in science and in whatever tended to widen the field of knowledge.

These explorations of the territory beyond the Mississippi had little immediate bearing on the interests of commerce or agriculture; but the government was actively engaged in measures of direct value. July 4, 1805, William Henry Harrison, Governor of the Indiana Territory, closed a bargain with the Wyandots, Ottawas, and other Indian tribes, by which the Indian title over another part of Ohio was extinguished. The Indians thenceforward held within the State of Ohio only the country west of Sandusky and north of the old line fixed by the treaty of Greenville. Within the year the Piankeshaw tribe sold for a small annuity a tract of land in southern Indiana, along the Ohio River, which made the United States government master of the whole north bank of the Ohio to its mouth. These concessions, of the utmost value, were obtained at a trifling cost. “The average price paid for the Indian lands within the last four years,” wrote the Secretary of War,[7] “does not amount to one cent per acre.” The Chickasaws and Cherokees sold a very large district between the Cumberland and Tennessee rivers in Tennessee, so that thenceforward the road from Knoxville to Nashville passed through no Indian land. In Georgia the Creeks were induced to sell an important territory between the Oconee and Ocmulgee rivers. In these treaties provision was also made for horse-roads through the Creek and Cherokee country, both from Knoxville and from central Georgia to the Mobile River.