Xavier, before his voyage to Japan, had recalled him from Ormuz, with design of sending him to that country, or else of taking him with himself to China. Yet he altered both those intentions; for, after many serious debates within himself, he thought it most convenient to leave Barzaeus at Goa, where, since his return from Ormuz, he had laboured in the ministry with great success; but his principal reason was, the necessity of the college of St Paul, which had not yet shaken off all the ill symptoms of the government of Gomez, and which stood in need of a superior, whose conduct should be regular. On these considerations, he made him rector of the college of Goa, and also vice-provincial of the Indies, by the authority which he had received from the general of the order. For the saint, at his return from Japan, found two patients waiting for him, which had been expedited from Rome in the year 1549, one bearing date the 10th of October, the other the 2nd of December, as the minutes which are kept in the archives of the Society declare. By the first, Ignatius constitutes Father Xavier provincial of the Indies, and of all the kingdoms of the East, of which he made a particular province, distinct from that of Portugal; by the second, he endows him with all the privileges which the popes have granted to the head of the order, and to those members of it to whom the general shall please to impart them. For what remains, see here the form of Barzaeus's establishment, which is preserved in the archives of Goa, and written by the hand of Father Xavier.
"Master Gasper, I command you, in virtue of holy obedience, as superior of the company of Jesus in these countries of the Indies, to take the government of this college of Santa Fe, in quality of rector; persuaded, as I am, of your virtue, your humility, your prudence, and of all those qualities which make you proper for the governing of others.
"I will, that all the fathers and Portuguese brothers of the Society of Jesus, who are spread over this new world from the Cape of Good Hope, as far as Malacca, the Moluccas, and Japan, be subject to you. I will, in like manner, that all those who shall come from Portugal, or from any other country of Europe, into the houses of the Society under my obedience, should acknowledge you for their superior; if it happen not, that our Father Ignatius name some other rector of this college of Goa, as I have already requested him by my letters; informing him at large of the necessity of sending hither some experienced person, in whom he much confides, to govern this college, and all the missions of our Society depending on it. If then any of the Society sent by Father Ignatius, or by any other general of the Society of Jesus, with patents signed in due form, shall arrive at Goa, to take the government of this house, and of those who are subjected to it, I command you, in the same virtue of holy obedience, to resign the government into his hands forthwith, and to be obedient to him in all things."
Xavier having thus declared Barzæus superior in a full assembly of the college, kneeled down, and acknowledged him for such, thereby giving a public example of submission. After which, he commanded all of them, in virtue of holy obedience, to be subject to him, and ordered him to expel from the society, all such as should enterprize ought against his authority, or refuse obedience to his orders. He ordered him, I say, positively to expel them, without consideration of their capacity, their eloquence, or any other gifts of nature; adding, that whatever excellent qualities they had, they wanted those which were essential, namely, humility and obedience.
Barzaeus replied not one word when it was intimated to him, that he should not go to China, how desirous soever he were of that voyage; and it may be said, that, on this occasion, he made a noble sacrifice of all his fervent zeal to his obedience. But when he was nominated both rector and vice-provincial, confounded at the mention of those dignities, he said aloud, "That he was not endued with the spirit of government." He was ready to die of shame, when he saw the saint upon his knees before him; and, with great precipitation, fell also on his knees, and humbly begged of him, with tears in his eyes, that he would consider his infirmities. The saint, who had a perfect insight into his integrity, would not hearken to him, and judged him to be so much the more worthy of those two employments, as he judged himself to be incapable. As Barzaeus was the desire of all in all places, and yet his presence was necessary at Goa, not only for the due regulation of the college, but also for the good of missions, Xavier forbade him, in virtue of holy obedience, to depart out of the isle of Goa during the space of three years ensuing; and for this reason, that Barzaeus having this tie of prohibition upon him, might be privileged to refuse any towns which might desire him amongst them; and that if his refusal should displease them, yet at least the unkindness might not rest on him.
After all these punctual orders, Xavier gave in writing, to the new rector, such instructions as he was to use in the government of his inferiors, and in reference to the conduct of himself; according to what all of them had proposed to themselves, to have no design, save only ad majorem Dei gloriam; to God's greater honour. Those instructions are very ample, and I shall give you only the most material.
"Have before your eyes continually your own nothingness; and endeavour, above all things, to have your mind so possessed with it, that the contempt of yourself may never leave you. Always treat the fathers of the Society with great mildness and respect; as well those who inhabit with you, as those who live in other places at a distance. Let not the least roughness, or haughty carriage, appear in you, if it be not when your moderation and humility are turned into contempt; for on such occasions, having nothing in your intentions but the good of your interiors, and not making the contempt of your authority the object of your vengeance, you are to make the guilty somewhat sensible of your power. But you shall only punish them so far as need requires, and for their amendment, and the edification of our brethren, who were witnesses of their fault. All the offences which shall be committed, either by the fathers or the brothers, against the rule of obedience, ought to be punished by some correction; and in so doing, the character of priesthood must be no privilege to the offender. If any of your inferiors act presumptuously against you, and, full of self-opinion, resist you with stubbornness, raise yourself in opposition to their pride, and speak magisterially to them. Let your behaviour towards them have more of severity than of mildness. Impose some public penance on them; and beware, of all things, that they may not observe in you the least remissness, which they will be sure to interpret fear; for nothing more encourages the untractable and haughty to rebellion, than the softness and fearful spirit of a governor. And it is not credible, how assuming, proud, and peremptory, they will grow, when once they find the reins are slackened, and that their pusillanimous superior is afraid of punishing their want of due respect. Impunity hardens that sort of people in their insolence; or rather, it makes them more and more audacious; which disturbs the peace of religious houses. Execute then my orders, without fearing the opinion or speech of people; and let no consideration, no regard of persons, hinder you from the performance of your duty. Amongst your inferiors, you will find some who are neither obstinate nor disobedient, but who are weak; who are forgetful of what is enjoined them, who indeed despise not the orders of their superiors, but sometimes neglect them, either out of faintheartedness, or want of sense. Reprehend such men with more gentleness and moderation, and temper your reproof with the mildness of your countenance; and if you find it necessary to punish them, impose but an easy penance on them. Never admit into the Society such as are not endued with judgment, and good natural parts; nor those who are of a weak constitution, and proper for no employment, or of whom you may reasonably suspect, that they would enter into religion for secular respects, rather than out of a sincere devotion of serving God. When they shall have ended their exercises, you are to employ them in the service of the sick in the public hospitals, and in the meanest offices of the house. You shall cause them to give you an account of the endeavours they have made, to acquit themselves well of their ordinary meditations, according to the form prescribed. If you are assured, that they are lukewarm and faint at their devotions, you will do well to dismiss them, and turn them out of the Society betimes; or if there be any hope of their amendment, you shall withdraw them for some days from those interior exercises; depriving them, by way of penance, of an honour which their negligence has made them unworthy to enjoy; and such indeed is that of communicating with God in prayer, to the end, that, being ashamed to stand excluded from that celestial commerce, they may desire more ardently to be re-admitted to it. I recommend extremely to you, that you pay an extraordinary respect to my lord the bishop; and that you be obedient to him. Beware of doing any thing which may displease him; endeavour, on the contrary, to serve him in all things according to your power; and acknowledge, by all manner of good offices, those infinite obligations which we have to so charitable a father and benefactor. Command those fathers who are out of Goa, to write to him from time to time, but not too prolixly; and to give him an account of the fruit of their labours. That they mention in their letters, as far as truth will give them leave, the commendation of his vicars; and omit not the other good actions of the religious; and if they can say no good of them, let them be silent of them; for we are not to imagine that our duty obliges us to complain to the bishop, of the ill conduct of his vicars, or of other gospel-labourers; there will never be wanting those who will ease us of that trouble. Beware, not to trouble yourself with the management of worldly business; nor even to encumber your inferiors with it, on any occasion whatsoever. When secular men shall desire to engage you in the employments of civil life, return this answer, 'That the time which remains free to you from preaching, and the administration of the sacraments, is scarce sufficient for your studies and devotions, which are yet necessary to you before you go into the pulpit, or appear in the tribune of penance; that you cannot prefer the care of worldly things, before the cure of souls, without perverting the order and rule of charity.' By this means you shall disengage yourself from all those sorts of encumbrances; and without this circumspection, you will do great prejudice to the Society; for you ought to understand, that the world often enters by this door into religious houses, to the extreme damage both of the religious, and of religion.
"In the visits which are made to you, endeavour to find out the bottom and end of their design, who come to see you. For some there are, the least part of whose business is to be instructed in spirituals; it is only temporal interest which brings them to you: there will even be some, who will come to confession, on no other motive, than to acquaint you with the necessities of their family. The best counsel I can give you, is to stand upon your guard with such; and, to be rid of them, let them know from the very first, that you can neither furnish them with money, nor procure them any favour from other men. Be warned to have as little discourse with this sort of people as possibly you can; for most commonly they are great talkers, and if you trouble yourself with giving them the hearing, you are almost certain to lose your time. For what remains, disquiet not yourself with what they think or say of you; let them murmur on, and do you take up a resolution of standing out so firmly, that they may not find the least concernment in you; for the shew of any natural sensibility would discover that you are not enough disengaged from the world, as if you were wavering what part to take betwixt the world and Christ. Remember, that you cannot covet popular approbation without betraying your ministry, or becoming a deserter of your sacred colours, in going back from that evangelical perfection, which you are obliged to follow, with an unrelenting ardour."
After this, Xavier gave Barzaeus sundry particular orders, relating to the persons and houses of the Society.
And now he chose for his companions, Balthazar Gago, Edward Silva, and Peter Alcaceva, with Francis Gonçalez, and Alvarez Ferreyra de Monte Major; without reckoning into the number a young secular Chinese, named Antonio, who had been brought up in the seminary of Sainte Foy. Some of these were intended for China, and others for Japan. Father Ignatius had written to Father Xavier, that it was of great importance to send from the Indies into Europe one of the Society, well versed in the eastern affairs, who might render an exact account of all things to the king of Portugal, and the Pope; as a means of procuring temporal supplies from the one, and spiritual favours from the other; both which were necessary for the further increase of Christianity in Asia. Father Francis did not receive those letters till after his voyage of Japan. He had thought of these very things formerly, but now seeing that the judgment of Ignatius concurred with his, he deputed into Italy and Portugal, Andrew Fernandez, a man of parts and probity, who was not yet in priest's orders. He not only gave him ample informations concerning the present condition of the Indies, but also wrote large letters on the same subject, to the king of Portugal, to Father Ignatius, and to Simon Rodriguez. Being now ready to go for the voyage of China, he gave notice of his intentions to king John, in this ensuing letter.