| Guns. | Commanded by | |
| Principe Real | 84, | —Adm. Manoel da Cunha. —Capt. Manoel da Canto. |
| Rainha de Portugal | 74, | —Capt. Francisco Manoel Soetomayor. —The Princess Dowager and younger daughters came in this ship. |
| Conde Henrique | 74, | Capt. Jose Maria de Almeida. |
| Medusa | 74, | Capt. Henrique de Souza Prego. |
| Affonso d'Abuquerque | 64, | —Capt Ignacio da Costa Quinatella. —The Queen and family in this ship. |
| D. Joam de Castro | 64, | Capt. Don Manoel Juan Souça. |
| Principe do Brazil | 74, | Capt. Garçaŏ. |
| Martim de Freitas | 64, | Capt. Don Manoel Menezes. |
| FRIGATES. | ||
| Minerva | 44, | Capt. Rodrigo Lobo. |
| Golfinho | 36, | Capt. Luiz d'Acunha. |
| Urania | 32, | Capt. Tancos, Conde de Viana. |
| Cherua Princesa S.S. | 20, | Commanded by a lieutenant. |
| BRIGS. | ||
| Guns. | Commanded by | |
| Voador | 22, | Lieut. Fs. Maximilian. |
| Vingança | 20, | Capt. Nicolas Kytten. |
| Gaivota | 22. | |
| SCHOONER. | ||
| Curiosa | 12, | Hoisted French colours and deserted. |
Of these vessels, the Martin Freitas is now the Pedro Primero. The Principe Real is the receiving ship at Rio. The Rainha de Portugal is at Lisbon, as well as the Conde Henrique. The Medusa is the sheer hulk at Rio. The three other line-of-battle ships either broke up or about to be so. Of the frigates, the Minerva was taken by the French in India. The Golfinho is broken up, and the Urania was wrecked on the Cape de Verde Islands. The Voador is now a corvette. The Vingança is broke up, and the Gaivoto is now the Liberal.
| List of the Ships that remained at Lisbon. | ||
| Guns. | ||
| S. Sebastao | 64, | Unserviceable without thorough repair. |
| Maria Prima | 74, | Ordered for floating battery—not fitted. |
| Vasco de Gama | 74,[21] | Under repair, nearly ready. |
| Princesa de Beira | 64, | Ordered for floating battery. |
| FRIGATES. | ||
| Fenix | 48, | In need of thorough repair (broke up at Bahia). |
| Aamazona | 44, | Do. Do. ( Do. at Lisbon). |
| Perola | 44, | Do. Do. ( Do. at Lisbon). |
| Trítaõ | 40, | Past repair. |
| Veney | 30, | Past repair. |
[21] Hulk at Rio.
[22] These were the Visconde de Rio Seco, who managed all; the Marquis de Vagos, gentleman of the bed-chamber; Conde de Redondo, who had the charge of the royal pantries; Manoel da Cunha, admiral of the fleet; the Padre José Eloi, who had the care of the valuables belonging to the patriarchal church.
[23] On the removal of the family of Braganza to Brazil, Sir Samuel Hood and General Beresford took possession of Madeira, in trust for Portugal, till a restoration should take place.
[24] The Rainha de Portugal, and the Conde Henrique with the Princess Dowager and the younger Princesses arrived straight at Rio, on the 15th of January. The Martim de Freitas and Golfinho arrived on the 15th at Bahia for supplies, sailed for Rio on the 24th, and arrived on the 30th.
[25] The Conde died in May, 1809, at the age of 35, leaving ten children, and an embarrassed estate.
[26] Godoy was to have Alentejo and Algarve; Etruria, Entre Minho e Douro with the city of Oporto, the rest was to be sequestrated till a general peace, when a Braganza was to be placed at its head, on condition that England should restore Gibraltar, Trinidad, &c. to Spain.
[27] 28th January, 1808.