After the termination of this engagement, several regiments—either the Gladden brigade, now commanded by Colonel Deas, or one of the brigades of Breckenridge's reserve—moved into the field to the left of Lauman. Colonel Williams, commanding Hurlbut's first brigade, had been killed in an artillery duel across the field, and the brigade, now commanded by Colonel Pugh, had been drawn back from the field, behind a fence along its northern boundary. The force that moved into the field was not only confronted by the brigade under Colonel Pugh, but its flank was commanded by the Seventeenth and Twenty-fifth Kentucky, which General Lauman promptly wheeled to the left, against the fence bounding the westerly face of the field. The assault made in this field was gallant and deliberate, but brief and sanguinary. Pugh's command remained still until the lines, advancing over the open field, were near. Then rising, they poured in a volley, and continued firing into the smoke until no bullets were heard whistling back from the front. The two Kentucky regiments poured in their fire upon the flank, and when the smoke cleared away, the field was so thickly strewn with bodies, that the Third Iowa, supposing it was the hostile force lying down, began to reopen fire upon them.

Before Withers' division became thus engaged with Hurlbut, McArthur, and Stuart, General Johnston had dispatched Trabue's brigade, of Breckenridge's reserve, off to his extreme left, to report to General Beauregard, who, stationed at Shiloh Church, was superintending operations in that quarter. The three brigades, Bowen, Statham, Trabue, composing the reserve, had marched in rear of General Johnston's right in echelon, at intervals of eight hundred yards. Johnston, observing with anxiety the stubborn resistance opposed to Withers' division, and eager to crush the National right, called up the remaining brigades of the reserve, Bowen and Statham, and pushed them forward. Bowen was first engaged, and the National left, in a series of encounters with the increased force in its front, gradually but slowly receded, always forming and rallying on the next ridge in rear of the one abandoned.

The Forty-first Illinois, constituting the left of Hurlbut's division, held its position, and the Thirty-second Illinois was moved from its place to support the Forty-first. The afternoon was come. Johnston directed Statham's brigade against this position. Statham deployed under cover of a ridge, facing and commanded by the higher ridge held by the Illinois regiments, and marched in line up the slope. On reaching the summit, coming into view and range, he was received by a fire that broke his command, and his regiments fell back behind the slope in confusion. Battle's Tennessee regiment on the right alone maintained its position and advanced. Lytle's Tennessee regiment three times rallied and advanced; but, unable to stand the fire, fell back. Every time it fell back, the Thirty-second Illinois threw an oblique fire into Battle's regiment, aiding the direct fire of the Forty-first, and preventing Battle's further advance. The Forty-fifth Tennessee could not be urged up the slope. Squads would leave the ranks, run up to a fence, fire, and fall back to place; but the regiment would not advance. General Breckenridge, foiled and irritated, rode to General Johnston and complained he had a Tennessee regiment that would not fight. Governor Harris, of Tennessee, who was with Johnston, remonstrated, and riding to the Forty-fifth, appealed to it, but in vain. General Johnston moved to the front of the brigade, now standing in line, rode slowly along the front, promised to lead them himself, and appealed to them to follow. The halting soldiers were roused to enthusiasm. Johnston, Breckenridge, and Governor Harris in front, followed by the brigade, charged up the slope and down the hollow beyond. Unchecked by the hot fire of the Illinois regiments, they pushed up the higher slope, and the position was gained.

The Illinois regiments fell back slowly, halting at intervals to turn and fire, and were not pursued. One of those Parthian shots struck General Johnston, cut an artery, and, no surgeon being at hand, he bled to death in a few minutes. His body was carried at once by his staff back to Corinth. General Beauregard, at his station at Shiloh Church, was notified of the death, and assumed command. Albert Sydney Johnston was a man of pure life, and, like McPherson, full of the traits that call out genuine and devoted friendships. He was esteemed by many the ablest general in the Confederate service. His death was deplored in the South as a fatal loss. It was half-past two when Johnston fell. The loss paralyzed operations in that part of the field, and for an hour there was here a lull. The two Illinois regiments, though not followed, failed to rally, and fell back to a bluff near the landing, where Colonel Webster was putting batteries into position.

General Bragg, hearing of the death of General Johnston while he was superintending operations in front of Prentiss and W.H.L. Wallace, rode to the Confederate right. He there found a strong force, consisting of three parts, without a common head: General Breckenridge, with two brigades of his reserve division, pressing forward; General Withers, with his division greatly exhausted and taking a temporary rest; and General Cheatham, with his division of Polk's corps, to their left and rear. Bragg at once assumed command, and began to assemble these divisions and form them for a general advance. Hurlbut, observing these preparations, moved Lauman's brigade, which had already twice replenished its boxes and expended one hundred rounds of cartridges—to his left to fill the gap made by the retreat of the Thirty-second and Forty-first Illinois. Willard's battery, that accompanied McArthur's brigade, was posted near the road from the landing to Hamburg. Hurlbut brought up two twenty-pound guns of Major Cavender's artillery, which were served by Surgeon Cornine and Lieutenant Edwards. A little after four, according to Bragg, about half-past three according to Hurlbut, Bragg moved forward. The artillery, aided by the rapid fire of Hurlbut's infantry, checked the first impulse and made the advancing line pause. Hurlbut, taking advantage of the lull, and first notifying Prentiss, withdrew Lauman's brigade and the artillery. Bragg's line advanced again. Hurlbut attempted to make another stand in front of his camp, but the attempt was ineffectual. He fell back to the height behind Webster's batteries.

The Third Iowa and Twenty-eighth Illinois, under Colonel Pugh, made a desperate effort to maintain their position, but were ordered by General Hurlbut to fall back when Lauman retired. These two regiments fell back fighting, forming wherever the ground gave vantage, and turning upon their pursuers. In the little field they halted and replenished their cartridge-boxes. Here the Twenty-second Alabama attacked them, but was so roughly handled that it took no further part in the contest that day. As these two regiments fell back thus slowly, from time to time turning at bay, portions of Bragg's command were pushing behind them and the troops of Hardee, coming from the front of Sherman and McClernand, were reaching toward their front. A narrow gap was left, and through a gauntlet of fire, still fighting, the little band pressed on and joined Hurlbut behind Webster's artillery.

The gunboat Tyler, commanded by Lieutenant Gwin, fired from ten minutes to three o'clock until ten minutes to four upon Breckenridge's brigades, and, joined by the Lexington, commanded by Lieutenant Shirk, fired later upon the portion of Bragg's command close to the river-bank, for thirty-five minutes. This fire drove a battery from its position, threw Gibson's brigade and a portion of Trabue's brigade into disorder, killed ten and wounded many of Wood's brigade, killed and wounded a number of Anderson's brigade, and compelled it to seek shelter in a ravine.

As the National lines were drifting back toward the landing, Colonel Webster, of General Grant's staff, gathered all the artillery within reach—Major Cavender's six twenty-pounders, Silversparre's twenty-pound Parrotts, and some light batteries—on a commanding position from a quarter to half a mile from the landing. Immediately above the landing a wide and deep ravine opens to the river. For some distance back from the river its bottom was filled with back-water and was impassable. Half a mile back it was still deep, abrupt, and wet, though passable for infantry. Here Colonel Webster gathered from thirty-five to fifty guns. Two of Hurlbut's batteries—Mann's, commanded by Lieutenant Brotzman, and Ross'—had done brilliant service; Brotzman's battery of four pieces had fired off one hundred and ninety-four rounds per gun. Ross' battery was lost in the retreat. Brotzman lost so many horses that he was able to bring off only three guns. These took place in Webster's frowning line. Hurlbut was joined at this position by half of Veatch's brigade, which had been with McClernand through the day, and reformed his division in support of the artillery. General Grant directed him to assume command of all regiments and coherent fragments near. The Forty-eighth Ohio, of Buckland's brigade, being then at the landing, some of W.H. L. Wallace's regiments, that succeeded in breaking through the encircling force, and other detachments, reported to him. Squads of men, separated from their commands, fell in. Hurlbut thus gathered in support of the artillery a force in line which he estimated at four thousand men.

General Bragg proposed to push his success and attempted to withdraw his two divisions, Ruggles' and Withers', from the tumult which accompanied the surrender, and ordered them to press forward and assault the position to which Hurlbut had fallen back. When Ruggles received Bragg's order for farther advance, one of his brigades, Pond's, was on the extreme Confederate left, near Owl Creek; Gibson's brigade was in confusion, caused by the fire of the gunboats; Anderson's was apart in a ravine, taking shelter from the same fire. But Ruggles began at once to assemble what force he could. Of Withers' division, the First Brigade was scattered. The brigades of Jackson and Chalmers received the order while they were resting in the field where the Third Iowa had rested and filled their cartridge-boxes, and where Jackson was about to replenish the empty boxes of his men. Withers immediately moved these two brigades forward to the deep ravine whose farther bank was crowned with the grim line of artillery, behind and to the right of which stood Hurlbut's command.

While there was this activity at the front, the aspect at the rear, about Shiloh Church, where General Beauregard kept his position, was very different. As the Confederate lines advanced, men dropping out of the ranks filled the woods with a penumbra of stragglers. Hunger and fatigue, stimulated by the remembrance of abandoned camps passed through, later in the day led squads—Beauregard and some of his staff say, led regiments—to straggle back from the fighting front to the restful and attractive rear. Language cannot be stronger than that used by General Beauregard. The fire of the gunboats, many of the shells passing over the high river-bank and exploding far inland, appeared even more formidable than it really was; and Beauregard was assured by a despatch, which he received that day on the field, that Buell, instead of being near Pittsburg, was, in fact, before Florence, and could not effect a junction. It must have been about five o'clock or a little later when Beauregard sent an order to his command to retire and go into bivouac. The order was delivered by his staff not only to corps commanders, but directly to commanders of divisions and brigades. General Ruggles, while attempting to assemble a force in pursuance of Bragg's order, received the command to retire.