For twenty-three years the people of Connecticut imagined that they enjoyed the benefits of the charter gained by Winthrop in 1662, "ye advantages and priviledges whereof made us indeed a very happy people; and by ye blessing of God upon our endeavours we have made a considerable improvement of your dominions here, which with ye defense of ourselves from ye force of both forraign and intestine enemies has cost us much expence of treasure & blood."[146] James II., however, cared for none of these things; the charter was forfeited in 1685; and like Massachusetts, Connecticut felt the heavy hand of the too zealous Sir Edmund Andros. Being "commissionated by his Majesty,"[147] Andros appeared with sixty grenadiers in 1687 at Hartford, and took over the government. On his capture, as already recorded, the people of Connecticut in May 1689 joyfully fell back upon their old form of government under the late charter, the forfeiture of which had been declared illegal in England.

Owing to King William's War, Connecticut was within an ace of losing its government, and for purposes of defence being united, in 1690, with its stronger neighbour New York; the proposals fell through, and the fears of the citizens were set at rest by a legal confirmation of their constitution. The colony from this time undoubtedly advanced. Its system of government was active and vigorous; each township controlled its own affairs, and in the early years of the eighteenth century local government lay entirely in the hands of the Select-men, to the exclusion of English officials. At the same time education was encouraged; a college was established by the clergy in 1698, which found its final home at Newhaven in 1717. Before this printing had been undertaken, the first press being erected in 1709 at New London; the immediate work done was not of a first-rate character, but it was the beginning of better things. At the same time it is only fair to point out that the colony was cursed by the presence of turbulent and quarrelsome negro and mulatto slaves; it was regarded with suspicion by the English governors as a protector of pirates; and it certainly must be blamed for its niggardly contributions of both men and money in the great expeditions against the French.

Connecticut was not the only settlement that was partly formed by a secession from the parent colony of Massachusetts; nor was it an isolated example of colonial establishments, for during the same period several other colonies grew up along the Eastern seaboard. The Reverend Roger Williams, after his banishment from Massachusetts in October 1635, purchased land from the Indians, and with twelve other householders settled at Providence, by the advice of Mr Winslow, the Governor of New Plymouth. Thus Williams was able to describe himself many years later as "by God's mercy the first beginner of the mother town of Providence and of the Colony of Rhode Island."[148] Williams' settlers immediately started a simple form of government, by which all freemen were to hold quarterly meetings and settle judicial questions, while five Select-men were to transact all executive business. Following Williams' example, Mrs Anne Hutchinson, as another refugee from the intolerance of Massachusetts, came to much the same district in 1637. She purchased from the Indians the island of Aquedneck, or, as it was afterwards known, Rhode Island. Her heretical followers soon founded the town of Portsmouth, and here the government was carried on by William Coddington as judge. Mrs Hutchinson, having now time for inventing new heresies, almost immediately caused a fresh secession, and some of her hitherto ardent admirers, finding her new doctrines intolerable, left Portsmouth, and under Coddington established themselves at Newport. The colonies were reunited in 1640, with Coddington as Governor, and a regular government was instituted composed of two "assistants" from each township.

Providence and Rhode Island were regarded with dislike and suspicion by all the other colonies, being classified as the asylum for sectaries, the hot-bed of anarchy, and the true home of extreme democracy. This attitude is not surprising when it is remembered that both colonies owed their existence to parties of religious outcasts. Rhode Island nevertheless prospered, although throughout the first few years of its existence it was the centre of disorder, bickerings, and factious quarrels. At the bottom of most of the trouble was Samuel Gorton, a contentious and troublesome man, leader of a band of fanatics, who had forced themselves upon a party of Williams' settlers at Pawtuxet. The settlers appealed to Massachusetts to remove him as "a proud and pestilent seducer";[149] and had indeed placed themselves under the jurisdiction of that colony for this very purpose. In 1643, Gorton, of "insolent and riotous carriage," with nine of his followers, was imprisoned for some months at Boston, for blasphemy. The quarrel, however, did not end here. It was carried by Gorton to England, where he appealed to the Parliamentary Commissioners, who commanded the General Court to allow Gorton and his band to dwell in peace. This, at last, the Massachusetts' government consented to do with contemptuous indifference, but when Gorton pleaded for their protection against the Indians he pleaded in vain.

In the same year as the conclusion of the Gorton controversy, Providence, Portsmouth and Newport, combined into a properly constituted community. This was the outcome of a visit paid to England in 1643 by Roger Williams, who asked for a definite charter of incorporation. In 1647, therefore, a general assembly of freemen, governor and assistants, with a court of commissioners, was established for the "Colony of Rhode Island and Providence Plantation." At first the assembly met in the different towns by rotation, and the method of voting was most complicated and non-progressive; every matter had to be voted on in each town, and was to be considered as lost unless it was carried by a majority in every town. So complex a system proved inadequate, and in 1664 an ordinary representative assembly was created. What was equally important and showed Rhode Island to be more enlightened than most of the other colonies, was the clear announcement of the doctrine of freedom of conscience to all who "live civilly." To the annoyance of Massachusetts the Rhode Island authorities consistently adhered to this doctrine, and refused to join in the barbarous persecutions of the Quakers.

The settlers expressly thanked Charles II. for sending Commissioners, and made great demonstration of their loyalty and obedience in 1665. Such actions are rather surprising in a Puritan colony, but they may have been due to the King's grant of a charter, two years before, in which they obtained a definition of their boundaries. The colony of this period was described with some minuteness by the Commissioners, who called attention to the fact that Quakers and Generalists were admitted, and that owing to the variety of sects there were no places for the worship of God, "but they sometimes associate in one house, and sometimes in another."[150] The colony certainly did not advance with the strides that had been made by Massachusetts, and the people were still extremely unpopular with the other colonists, being denounced on one occasion as "scum and dregs." Nevertheless under the government of Peleg Sandford in 1680, Rhode Island was a small, happy, self-sufficing colony. The chief town was Newport, built almost entirely of timber. As to exterior commerce it seems to have been non-existent; "wee have no shippinge belonginge to our Colloney, but only a few sloopes," and "as for Merchants wee have none, but the most of our Colloney live comfortably by improvinge the wildernesse."[151]

This happy state of affairs was somewhat rudely disturbed by James II.'s action in depriving Rhode Island and Providence Plantation of that charter of which they were so proud, and which gave "full liberty of conscience provided that the pretence of liberty extend not to licentiousnesse."[152] James' harsh treatment did not last for long, and to the joy of the inhabitants after the Revolution the action of the Papist King was declared illegal. A time of peace and prosperity now followed. From 1696 to 1726 Rhode Island increased in wealth and population, under the annually elected Governor, Samuel Cranston, who, during these thirty years of office, proved himself a firm, popular, and successful administrator.

During the year in which Rhode Island was established, another colony, New Haven, was founded to the South. In 1637 Theophilus Eaton, a leader in the Baltic Company, and "of great esteem for religion,"[153] together with a party of settlers who were wealthier men than most colonists, settled at the mouth of the Quinipiac River, facing Long Island. The religious beliefs of the settlers were of the most bigoted kind; their freemen were strictly limited to Church members; and their minister, "the reverend, judicious and godly Mr John Davenport,"[154] asserted that the scripture was sufficient guide for all civil affairs. They soon found "a fit place to erect a Toune, which they built in very little time, and with very faire houses and compleat streets; but in a little time they over-stockt it with Chattell, although many of them did follow merchandizing and Maritime affairs, but their remoteness from Mattachusets Bay, where the chiefe traffique lay, hindered them much."[155] Ten years after its foundation, the colony was seen to be commercially on the decline, although other towns had grown up such as Guildford, Milford, and Stamford. They were all governed as one town without representation, and the executive was placed in the hands of an elected Governor and four assistants. The commercial depression did not last for long; trade began to increase again, and Newhaven became a flourishing state, the inhabitants of which were noted for the magnificence of their buildings and their astonishing opulence.

After the Restoration the colony fell under the displeasure of the Crown. Two of the regicides, William Goffe and Edward Whalley had, first, come to Boston, then to Connecticut, and finally to New Haven. The home government ordered their arrest, and Winthrop was very active in sending these orders to the Governors of the different colonies, including the Governor of New Haven, who knew that these men had come within his rights of jurisdiction but took no steps to effect their arrest. For some time the King had had strong doubts as to the loyalty of New England as a whole; here, in any case, was a colony that needed watching; and so, in 1662, as has already been shown, New Haven was absorbed by Connecticut. There can be no doubt that Charles had now struck two hearty blows against the much vaunted New England Confederation. His refusal to allow the ill-treatment of the Quakers, and his punishment of New Haven, were sufficient to make the Confederation nothing more important than a triennial meeting of federal commissioners, who sat till 1684, but whose powers were nil, whose mutual beliefs were non-existent, and who were only in complete concord in resistance to the Indian raids.

Maine was yet another colony of New England, which had a purely independent foundation, but which was destined to be absorbed by its more prosperous neighbour. As early as 1623, Levitt established a settlement on Casco Bay;[156] while at the same time, Sir Ferdinando Gorges, "the Father of English Colonisation in North America,"[157] made a plantation at Saco. He followed this up by the formation of a company in 1631, but four years later the whole territory then called New Somersetshire was granted to Gorges. Five years later he received from Charles I. a charter granting to him "all that part and portion of New England lying and between the River Pascataway ... to Kenebeck even as far as the head thereof."[158] Sir Ferdinando very soon drew up a most grotesque constitution for his colony, creating almost more officials than there were citizens, and whose titles were very magnificent, but quite meaningless. In exactly the same district the New England Company claimed to have proprietary rights, and it was not long before many semi-independent settlements were made in the neighbourhood of Gorges Colony.