Governor Andros was at the fort with some soldiers, and sent for the clergymen to come to him, who declined. The people and train-bands rallied together at the Town House, where old Governor Bradstreet and some other principal men met to consult as to what should be done. The King's frigate in the harbor ran up her flags, and the lieutenant swore he would die before she should be taken, and he opened her ports and ran out her guns; but Captain George (prisoner in Boston) sent him word not to fire a shot, for the people would tear him in pieces if he did. In the afternoon the soldiers and people marched to the fort, took possession of a battery, turned its guns upon the fort and demanded its surrender. They did not wait for its surrender, but stormed in through the portholes, and Captain John Nelson, a Boston merchant, cried out to Andros, "I demand your surrender." Andros was surprised at the anger of an outraged people, and knew not what to do, but at last gave up the fort, and was lodged prisoner in Mr. Usher's house.
The next day he was forced to give up the castle in the harbor, and the guns of the battery from the shore were brought to bear upon the frigate. But the captain prayed that she might not be forced to surrender, because all the officers and crew would lose their wages; so she was dismantled for present security. All through the day people came pouring in from the country, well armed and hot with rage against Andros and his confederates; and the cooler men trembled lest some unnecessary violence might be done; so Captain Fisher, of Dedham, led Andros by the collar of the coat back to the fort for safety.
On the 20th Bradstreet and other leading men met, and formed a kind of provisional council. They carefully abstained from resuming their old charter, partly from fear and partly from doubt, and called upon the towns to send up deputies. When these met, on May 22, 1689, forty out of fifty-four were for "resuming," but a majority of the council opposed it, and time was spent in disputes; but at last the old Governor and magistrates accepted the control of affairs, though they would not consent to resume the charter. Thus the moment for action passed, and the colony lost that chance for reestablishing its old rights.
Rhode Island and Connecticut resumed their charters, which had never been legally vacated. Mr. Threat was obliged to take again the office of governor of Connecticut, when the amazing reports of the revolution and seizure of the Governor in Massachusetts reached them. They issued loyal addresses to William and Mary, in which they said: "Great was that day when the Lord who sitteth upon the floods did divide his and your adversaries like the waters of Jordan, and did begin to magnify you like Joshua, by the deliverance of the English dominions from popery and slavery."
Andros escaped, but was apprehended at Rhode Island, and sent back to Boston, and in February, 1689, with Dudley and some others, he was sent away to England.
Increase Mather, the agent of the Massachusetts Bay Colony, with the aid of friends in England, endeavored to gain the restoration of the old charter from King William, but was unsuccessful; a new one was granted (1691), which contained many of the old privileges; but the King would not grant them the power of appointing their own governor; that power was reserved; and appeals from the colony courts to England were allowed. The Governor and the King both had a veto upon all colonial legislation. By it all religions except the Roman Catholic were declared free, and Plymouth was annexed to Massachusetts.
Thus two important elements of a free government were lost to Massachusetts; and powers which had been exercised over fifty years were, for nigh a hundred years, taken away. In Connecticut and Rhode Island they continued to elect their own rulers and to exercise all the powers of government. The new charter was brought over by Sir William Phipps, the new governor appointed by the King, who arrived on May 14, 1692.
Thus ended the rule of the theocracy in Massachusetts, and from this time forward the ministers and church-members possessed no more power than the rest of the people.