The Vice-Admiral of the fleet flew the St George at the fore, and at the main, as Admiral of his squadron, a flag with the St George in a canton and a field striped horizontally green and white. The Vice- and Rear-Admirals of this squadron flew a similar flag at their proper mastheads. The Rear-Admiral of the fleet flew the St George at the mizen, and he and the Vice- and Rear-Admirals of his squadron flew plain white flags at the main, fore, and mizen respectively. The squadronal flags of the first three squadrons as depicted in this manuscript are unique as admirals' flags; they appear to have been stern ensigns promoted for this special occasion.

Originally it had been intended to use plain flags of different colours for the four squadrons, as is shown by the following entry in the Navy Accounts to which Mr Oppenheim drew attention in his Administration of the Royal Navy.

Richerde Waters of London Upholster for iiijer large fflagges or Ensignes made of fine Bewpers conteyning in each of them xx*iiij v [85] yards of the same stuffe being each of them of severall Cullers viz One white, one Orengtawnie, one Blew and the iiijth Crimson Color which were appointed to be so made for the distinguishing of the iiijer squadrons of the flete ffor the service then intended, finding at his owne chardges all manner of stuffe & workmanshippe. xvili viiijs viijd[262].

Apart from the fact that "the unusual particularity of the item suggests that it was thought to require some justification, which would be natural if the flags referred to had never been used[263]," it may be pointed out that ten squadronal flags were needed, while this item only refers to four. There is, moreover, another entry in the same account which gives the sizes and prices of the "Ensignes & fflagges" provided for the expedition, at a total cost of £371. 8s. 4d. Descriptions of these flags are unfortunately not given, but it is a significant fact that of the largest size, sixteen breadths[264], ten were supplied.

The reason for the abandonment of the original intention to use plain-coloured flags for the squadrons of the 1596 expedition is not known, but when, in 1625, another expedition was sent out against Cadiz the fleet was divided into three squadrons, each under three admirals, with red, blue, and white flags respectively.

This expedition set sail in October, 1625, but four months earlier a much smaller fleet, also divided into three squadrons, had been sent to conduct the Queen from Boulogne to England. The difference in the Admirals' flags worn on these two occasions is significant, for it shows that there was no established practice applicable to large fleets.

The Instructions[265] issued by Buckingham in June for the Boulogne fleet provide that the Admiral shall wear the Union flag at the main, and each ship of his squadron a pendant at the main masthead. The Vice- and Rear-Admirals are to have the Union at the fore and mizen respectively, and the private ships[266] of their squadrons pendants at those mastheads.

But when the larger fleet was set forth in October each of its three squadrons had three flag officers. The instructions issued by the Commander-in-Chief, Sir Edward Cecil (afterwards Lord Wimbledon) on 3rd October, contained the following provision:

17. The whole fleet is to be divided into three squadrons: the admiral's squadron is to wear red flags and red pendants on the main topmasthead; the vice-admiral's squadron to wear blue flags and blue pendants on the fore topmasthead; the rear admiral's squadron to wear white flags and white pendants on the mizen topmast heads.

The wording of this instruction is somewhat ambiguous. Owing to the absence of a comma after "flags," it may be taken to read that every ship was to have both a flag and a pendant in one of the three tops, but this would leave no ready means of distinguishing the flag-ships. Monson and Boteler, who wrote shortly after this date, say that the squadrons of a fleet were distinguished by coloured pendants hung from the main, fore, and mizen tops respectively[267], so that we may conclude that the arrangement of flags on this occasion was as follows: